Research Publications

Page Updated On :12-07-2016



Amitha Mithra SV, Kar M, Mohapatra T, Robin S, Sarla N, Seshashayee M, Singh K, Singh AK, Singh NK & Sharma RP. 2016. DBT propelled national effort in creating mutant resource for functional genomics in rice. Curr Sci 110: 543-548.


Arora K, Rai AK, Gupta SK, Singh PK, Narula A, & Sharma TR. 2015. Phenotypic expression of blast resistance gene Pi54 is not affected by its chromosomal position. Plant Cell Rep 34: 63-70.


Bhati J, Chaduvula KP, Rai A, Gaikwad K, et al. 2016. In-silico prediction and functional analysis of salt stress responsive genes in rice (Oryza sativa). J Rice Res 4: 164.


Chaduvula KP, Bhati J, Rai A, Gaikwad K, et. al. 2015. In-silico expressed sequence tag analysis in identification and characterization of salinity stress responsible genes in Sorghum bicolor. Aus J Crop Sci 9: 799-806.


Chandrashekar N, Ali S, Rawat S & Grover A. 2015. Gene expression profiling of Arabidopsis thaliana chitinase genes in response to Alternaria brassicae challenge. Indian Phytopathol 68: 106-111.


Chhapekar  S,  Raghavendrarao  S,  Pavan  G, Ramakrishna  C,  Singh  VK,  Phanindra  MLV, Dhandapani G, Sreevathsa R & Kumar PA. 2015. Transgenic rice expressing a codon-modified synthetic CP4-EPSPS confers tolerance to broad-spectrum herbicide, glyphosate. Plant Cell Rep 34: 721-731.


Chidambaranathan   P,   Jagannadham   PTK, Satheesh V, Jain PK & Srinivasan. 2016. Expression analysis of six chromatin remodeling complex genes (SWR1) in chickpea in different tissues and during heat stress Indian. J Genet Plant Breeding 76: 47-56.


Choudhary  M,  Jayanand  &  Padaria  JC.  2015. Transcriptional   profiling   in   pearl   millet (Pennisetum glaucum L.R. Br.) for identification of differentially expressed drought responsive genes. Physiol Mol Biol Plants 21: 187-196.


Dash PK, Gupta P & Rai R. 2015. Hydroponic method of halophobic response elicitation in flax (Linum usitatissimum) precise down-stream gene expression studies. Intl J Trop Agril. 5: 1-7.


Deka S & Barthakur S. 2015. Impact of biorational pesticides and response of annexin gene expression in tomato (Solanum lycopersicum) and capsicum (Capsicum annum L.) in biotic stress management under greenhouse condition. Ann Agric Res 36: 233-242.


Deokar AA, Kondawar V, Kohli D, Aslam M, Jain PK, Karuppayil M, Varshney RK & Srinivasan R. 2015. The CarERF genes in chickpea (Cicer arietinum L.) and the identification of CarERF116 as abiotic stress responsive transcription factor. Funct Integr Genomics 15: 27-46.


Ganeshan P, Jain A, Parmar B, Rao AR, Sreenu K, Mishra P, Mesapogu S, Subrahmanyam D, Ram T, Sarla N & Vandna Rai. 2016. Identification of salt tolerant rice lines among interspecific BILs developed by crossing Oryza sativa × O. rufipogon and O. sativa × O. nivara. Aust J Crop Sci 10: 220-228.


James D, Tarafdar A, Biswas K, Sathyavathi TC, Padaria JC & Kumar PA. 2014. Development and characterization of a high temperature stress responsive subtractive cDNA library in Pearl Millet (Pennisetum glaucum L.R. Br.). Ind J Exp Biol 50: 543-550.


Kanakachari M, Solanke AU, Prabhakaran N, Ahmad I, Dhandapani G, Jayabalan N & Kumar PA. 2015. Evaluation of suitable reference genes for normalization of qPCR gene expression studies in brinjal (Solanum melongena L.) during fruit developmental stages. Appl Biochem Biotechnol DOI: 10.1007/s12010-015-1884-8.


Khanna A, Sharma V, Ellur RK, Shikari AB, Gopala Krishnan S, Singh UD, Prakash G, Sharma TR, Rathour R, Variar M, Prashanthi SK, Nagarajan M, Vinod KK, Bhowmick PK, Singh NK, Prabhu KV, Singh BD & Singh AK. 2015. Development and evaluation of near-isogenic lines for major blast resistance gene(s) in Basmati rice. Theor Appl Genet DOI: 10.1007/s00122-015-2502-4.


Khomdram S & Barthakur S. 2015. In situ evaluation of high temperature stress in wheat (Triticum aestivum L.) - validation of a portable heat trap chamber, Ann Agric Res 36: 123-131.


Koramutla MK, Bhatt D, Negi M, Venkatachalam P, Jain PK & Bhattacharya RC. 2016. Strength, stability, and cis-motifs of in silico identifiied phloem-specifiic promoters in Brassica juncea (L.). Front Plant Sci DOI: 10.3389/fpls.2016.00457.


Kumar A, Kohli D, Joshi I, Satheesh V, Abdin MZ, Sirohi A, Srinivasan R & Jain PK. 2016. Characterization of root-knot nematode responsive and root-specific promoter containing PIN domain from Arabidopsis thaliana (L.) Heynh. Ind J Genet Plant Breeding 76: 75-83.


Kumar R, Sreenu K, Singh N, Jain N, Sigh NK & Rai V. 2015. Effect of drought stress on contrasting cultivars of rice. Intl J Trop Agric 33: 1559-1564.


Kumar S, Kanakachari M, Dhandapani G, Kumar K, Prabhakaran N, Padmalatha KV, Solanke AU, Gamanagatti S, Hiremath V, Katageri IS, Leelavathi S, Kumar PA & Reddy VS. 2015. Genome wide transcriptomic and proteomic analyses of bollworm-infested developing cotton bolls revealed the genes and pathways involved in the insect pest defence mechanism. Plant Biotechnol J DOI: 10.1111/pbi.12508.


Lone SA, Yadav R, Malik A & Padaria JC. 2016. Molecular and insecticidal characterization of Vip3A protein producing Bacillus thuringiensis strains toxic against Helicoverpa armigera (Lepidoptera: Noctuidae). Can J Microbiol 62: 179-190.


Madhav MS, Siva Raju K, Gaikwad K, Vishalakshi B, Murthy TGK & Umakanth B. 2015. Development of new set of microsatellite markers in cultivated tobacco and their transferability in other Nicotiana spp. Mol Plant Breeding 6: 1-13.


Mishra S, Singh B, Panda K, Singh BP, Singh N, Misra P, Rai V & Singh NK. 2016. Association of SNP haplotypes of HKT family genes with salt tolerance in Indian wild rice germplasm. Rice 9: 1-13.


Mohanrao MM, Singh DP, Kanika K, Goyal E & Singh AK. 2016. Deciphering the microbial diversity of Tattapani hot water spring using metagenomic approach. Internat J Agric Sci Res 6: 371-382.


Muthusamy SK, Dalal M, Chinnusamy V & Bansal KC. 2016. Identification and expression analysis of class I caseinolytic protease (Clp) genes in wheat. Front Plant Sci (Accepted).


Nagarajan   VK,   Satheesh   V,   Poling   MD, Raghothama  KG  &  Jain  A. 2016.  Arabidopsis MYB-related HHO2 exerts regulatory influence on a subset of root traits and genes governing phosphate homeostasis. Plant Cell Physiol (in press).


Negi M, Sanagala R, Rai V & Jain A. 2016. Deciphering phosphate deficiency-mediated temporal effects on different root traits in rice grown in a modified hydroponic system. Front Plant Sci (in press).


Nimmy MS, Kumar V, Singh AK, Jain PK & Srinivasan R. 2015. Expression analysis of a MATE-type transporter gene of Arabidopsis and its orthologues in rice and chickpea under salt stress. Indian J Genet Plant Breed 75: 478-485.


Padaria JC, Thuy NT, Tarafdar A & Yadav R. 2015. Development of a heat-responsive cDNA library from Prosopis cineraria and molecular characterisation of the Pchsp17.9 gene. J Hort Sci Biotechnol 90: 318-324.


Padaria JC, Yadav R, Yadav A & Kumar K. 2015. Cloning, expression and characterization of drought responsive NAC transcription factor from Ziziphus nummularia. Internat J Tropical Agric 33: 2987-2998.


Pandey S, Gulati S,  Goyal E, Singh S, Kanika K, Nain  L &  Saxena AK.  2016. Construction and screening of metagenomic library derived from soil for β-1, 4-endoglucanase gene.  Biocat Agric Biotechnol DOI: 10.1016/j.bcab.2016.01.008.


Panwar BS, Narula RK & Kaur S. 2015. Theoretical 3D modelling of a novel Cry toxin isolated from native Bacillus thuringiensis isolate SK-711. Ind J Entomol (in press).


Patil BL, Bagewadi B, Yadav JS & Fauquet CM. 2016. Mapping and identification of cassava mosaic geminivirus genome sequences for efficient siRNA expression and RNAi based virus resistance by transient agro-infiltration studies. Virus Res 213: 109-115.


Pattnaik S, Kumar V, Tiwari KK, Chandra Prakash, Singh A, Singh AK, Behera N, Panigrahi J, Mithra SVA, Mohapatra T. 2016. Physiological and molecular basis of water deficit stress tolerance in F1 hybrids and their parental lines. Indian J Genet (In Press).


Phukan D, Goyal V, Palit P, Kalia R, Koundal M, Mithra SVA, Ravi I, Yadava DK, Chinnusamy V & Mohapatra T. 2016. Expression analysis of candidate genes for abiotic stress tolerance in oilseed Brassica genotypes with contrasting osmotic stress tolerance. Indian J Expt Biol (In Press).


Phukan D, Singh B, Ravi I, Mithra SVA, Yadava DK, Chinnusamy V & Mohapatra T. 2016. Cloning and characterization of drought stress-induced NAC transcription factors from Brassica juncea and Sinapsis alba. Indian J Genet (In Press).


Pragya Mishra P, Mishra V, Takabe T, Rai V & Singh NK. 2016. Elucidation of salt-tolerance metabolic pathways in contrasting rice genotypes and their segregating progenies. Plant Cell Rep DOI: 10.1007/ s00299-016-1959-1.


Rakshit  S,  Swapna  M,  Dalal  M,  Sushma  G, Ganapathy  KN,  Dhandapani A,  Karthikeyan M & Talwar HS. 2016. Post-flowering drought stress response of post-rainy sorghum genotypes. Ind J Plant Physiol 21: 8-14.


Reddy SVR, Sharma RR, Barthakur S & Srivastava M. 2015. An efficient and rapid method for the isolation of RNA from different recalcitrant tissues of mango (Mangifera indica L.). J Hort Sci Biotechnol 90: 285-290.


Savadi  S,  Vasupalli  N,  Kumar  V,  Dargan  S, Gupta NC, Chamola R & Bhat SR. 2015. Effect of overexpression of Arabidopsis thaliana SHB1 and KLUH genes on seed weight and yield contributing traits in Indian mustard B. juncea L. (Czern). Indian J Genet 75: 349-356.


Sharma TR, Das A, Thakur S, Devanna BN, Singh PK, Jain P, Vijayan J & Kumar S. 2015. Oscillating transcriptome during rice-Magnaporthe Interaction. Curr Issues Mol Biol 19: 99-120.


Singh A, Singh DP, Tiwari R, Kanika K, Singh RV, Singh S, Prasanna R, Saxena AK & Nain L. 2015. Taxonomic and functional annotation of gut bacterial communities of Eisenia foetida and Perionyx excavates. Microbiol Res DOI: 10.1016/j. micres.2015.03.003.


Singh BP, Singh B, Mishra S, Kumar V & Singh NK. 2016. Genetic diversity and population structure in Indian wild rice accessions. African J Crop Sci 10: 144-151.


Singh  K,  Vaibhav,  Mathuria  RC,  Singh  GP, Singh PK, Singh S, Gogoi R & Aggarwal R. 2015. Characterization of yellow rust resistance genes by using gene postulation and assessment of adult plant resistance in some Indian wheat genotypes. Res Crop 16: 741-750.


Singh N, Jain N, Kumar R, Jain A, Singh NK & Rai V. 2015. A comparative method for protein extraction and 2-D gel electrophoresis from different tissues of Cajanus cajan. Front Plant Sci DOI: 10.3389/fpls.2015.00606.


Singh N, Jayaswal PK, Panda K, Mandal P, Kumar V, Singh B, Mishra S, Singh Y, Singh R, Rai V, Gupta A, Sharma TR & Singh NK. 2015. Single-copy gene based 50 K SNP chip for genetic studies and molecular breeding in rice. Nat Sci Rep DOI:10.1038/srep11600.


Singh N, Majumder S, Singh ON, Vikram P, Singh AK & Singh S. 2015. A large-effect QTL for grain weight in rice on chromosome 10. Aus J Crop Sci 9: 372-377


Singh P, Tiwari P, Prajapat RK, Sabatta BC & Kansal R. 2016. Use of Vigna radiata lectin gene in development of transgenic Brassica juncea resistant to aphids. Intl J Agri Sci Res 6: 199-209.


Singh RK, Singh VK, Raghavendrarao S, Phanindra MLP, Venkat Raman K, Solanke AU, Kumar PA & Sharma TR. 2015. Expression of finger millet EcDehydrin7 in transgenic tobacco confers tolerance to drought stress. Appl Biochem Biotechnol 177: 207-216.


Singh S, Chand S, Singh NK & TR Sharma. 2015. Genome-wide distribution, organisation and functional characterization of disease resistance and defence response genes across rice species. PLoS ONE 10: e0125964.


Singh WH, Kapila RK, Sharma TR & Rathour R. 2015. Genetic and physical mapping of a new allele of Pik locus from japonica rice ‘Liziangxintuanheigu. Euphytica DOI: 10.1007/ s10681-015-1437-9.


Sinha SK, Rani M, Bansal N, Gayatri, Venkatesh K & Mandal PK. 2015. Nitrate starvation induced changes in root system architecture, carbon-nitrogen metabolsim and miRNAs expression in nitrogen responsive wheat genotypes. Appl Biochem Biotechnol 177: 1299-1312.


Sundaresha  S,  Sreevathsa  R,  Appanna  VK, Arthikala M-K, Shanmugam NB, Shashibhushan NB, Hari Kishore CM, Pannerselvam R, Kirti PB & Udayakumar M. 2016. Co-overexpression of Brassica juncea NPR1 (BjNPR1) and Trigonella foenum-graecum defensin (Tfgd) in transgenic peanut provides comprehensive but varied protection against Aspergillus flavus and Cercospora arachidicola. Plant Cell Rep DOI: 10.1007/s00299- 016-1945-7 .


Thakur S,Singh PK, Das A, Rathour R, Variar M, Prashanthi SK, Singh AK, Singh UD, Chand D, Singh NK & Sharma TR. 2015. Extensive sequence variation in rice blast resistance gene Pi54 makes it broad spectrum in nature. Front Plant Sci DOI:10.3389/fpls.2015.00345.


Tiwari M, Krishnamurthy S, Shukla D, Kiiskila J, Jain A, Datta R, Sharma N & Sahi SV. 2016.

Comparative   transcriptome   and   proteome analysis to reveal the biosynthesis of gold nanoparticles in Arabidopsis. Sci Rep 6: 21733.


Tiwari P, Singh P, Prajapat RK, Sabatta BC & Kansal R. 2016. Cloning of Vigna mungo protease inhibitor gene and its efficacy against aphids. Res J Agri Sci (Accepted).


Tiwari S, Krishnamurthy SL, Singh B, Amitha Mithra SV, Atmakumari R Rao & Singh NK. 2016. Mapping QTLs for salt tolerance in rice (Oryza sativa L.) by bulked segregant analysis of recombinant inbred lines using 50K SNP chip. PLoS ONE 11: e0153610.


Vemanna VS, Swetha TN, Sheela SH, Babitha CK, Sreevathsa R, Reddy MK, Tuteja N, Reddy CP, Prasad TG & Udayakumar M. 2016. Simultaneous expression of regulatory genes associated with specific drought adaptive traits improves drought adaptation in peanut. Plant Biotech J 14: 1008-1020.


Vijayan J, Devanna BN, Singh NK & TR Sharma. 2015. Cloning and functional validation of early inducible Magnaporthe oryzae responsive CYP76M7 promoter from rice. Front Plant Sci 6: 371.


Waditee-Sirisattha      R,        Kageyama       H,        Fukaya M, Rai V & Takabe T. 2015. Nitrate and amino acid availability affects glycine betaine and mycosporine-2-glycine in response to changes of salinity in a halotolerant cyanobacterium Aphanothece halophytica. FEMS Microbiol Lett 362: DOI: 10.1093/femsle/fnv198.


Wagaba H, Patil BL, Mukasa S, Alicai T, Fauquet CM & Taylor NJ. 2016. Artificial microRNA-derived resistance to Cassava brown streak disease. J Virol Methods 231: 38-43.

Updated date: 12/07/2016 - 14:20